It could be that you have enabled by mistake the compile content filter and filter out some documents via label. To verify this, please open the Compile dialog and move your mouse to the right of “Compile: “Draft”” selection box(above the content list view). A gray button rectangle(without an icon) will appear. Press the gray rectangle and a popup will appear with options to filter the compile content. Unfortunately we have a bug which, do not show properly the button filter icon, which has been fixed and will be available with the next update.
“Draft” is the default name of the folder where you put your writing, if you start a project from the “Blank” project template. It’s renamed in various templates, and apparently you renamed it from whatever your template started with to “Making Right”. The convention when talking about that folder is to call it the “Draft” folder regardless of what it’s been renamed to.
The funnel icon to the right of that appears to be hidden, but if you click around in that area to the right of the topmost “Making Right”, you’ll end up finding the filtering options, and in that drop-down, you may find the reason that some things aren’t showing up.