Hello,
Is the PDF file definitely all text? That is, could some lines be rendered images that just look like text? (This can be difficult to tell.) What happens if you open the PDF in Preview and try to highlight there - does that have similar issues?
As for the page break issue, which program are you opening the document in? (Pages doesn’t respect RTF page breaks, for instance.)
This is definitely annoying, and you should let Apple know by leaving feedback here:
apple.com/feedback/pages.html
Word or OpenOffice, mainly - you can open an RTF file in either of those and then save as .doc, then open the .doc file in Pages. Alternatively, test out our latest beta version here:
https://forum.literatureandlatte.com/t/scrivener-2-x-update-betas-download-here/11262/1
So long as you have Java installed and are running 10.5 or above, this new beta will use some different converters which can generate .doc or .docx files with full footnote support (internally, it generates an RTF file and then passes it through some special Java converters we have licensed). So, you should be able to generate .doc or .docx files that you can open directly in Pages without any conversion necessary.
They can handle endnotes, but not footnotes. The reason for this is that, in order to generate a PDF file in Cocoa, the programmer has to provide the actual document - lay out all of the pages and text - and pass this to the Cocoa print engine. In other words, I (and Scrivener is the product of a single programmer, me) would have to lay out all of those footnotes on the pages, and that is a massive technical problem - thus you tend to find that end-of-page footnotes are only supported by programs developed by whole teams. (It may seem trivial, but consider: a page is laid out and you work out which footnotes are on it, so then you lay out those footnotes and adjust the bottom of the page to fit them, but then, in so doing, some of the text that is associated with the footnotes being inserted may end up getting pushed to the next page, meaning that so should the footnote, but that leaves more space which moves the text back up and… Eep, yeah.
) Scrivener was never intended to be a full layout program, but rather to concentrate on the writing stages and then allow the user to export to dedicated word processors for final layout and tweaks. Scrivener is not a word processor replacement, in other words.
That said, in the new beta - linked to above - it is possible, with Java installed, to create PDF files with footnotes by selecting “Proofing” from the “Print Settings” pane in Compile. When this is selected, Scrivener will generate an RTF document and use those special Java-based, third-party converters to convert the RTF file to PDF, rather than using Scrivener’s own layout system.
Hope that helps!
All the best,
Keith