For me, it varies depending on the size of the project. For my regular columns or other short (<1000 wds) pieces, I create an annual project and call it something like " stories 2008." In that project, I set up a separate research folder for each story, and into that goes press releases, stories clipped from the web, etc. I create each draft in the draft folder and give it a slug like ācolumn 2-17ā or " 2-5" ; the file names arenāt so important anymore thanks to Scrivenerās keywords and spotlight. When writing, I split the screen vertically, with my notes (from the Research folder) on the left and the draft article in progress on the right. I seldom outline those short pieces. I write the thing, export draft, and email the draft to my impatient editor.
For longer pieces, I use a separate project for each story. I outline each draft by creating lots of little files in the Binder, and treating them as outline points. I used to use a separate outliner (OmniOutliner), then I started making a separate outline document in Scrivener, until I realized: the beauty of Scrivener is that the outline IS the story. Now, I just write each little section (using project and document notes as necessary), which might be just a paragraph or several pages, then rearrange them in the Binder, then Edit Scrivenings, clean it up, then Compile Draft, export, etc.
One of my new yearās resolutions is to use Scrivenerās Corkboard, References, and hyperlinks more. Iām sure they would make my work more efficient, at least, but I just havenāt broken some of my pre-Scrivener habits yet. Or maybe I just work better using the Binder than the Corkboard because I donāt generally need to see more than the title of the card/outline point when working this way.
I described working on a really long magazine piece using Scrivener last year here.
Hope this answers your question, but Iām happy to try again if it doesnāt. And I make no claim whatsoever that Iāve arrived at the ideal article production process; in fact, Iād be grateful to hear suggestions about how to improve it. Iād love to experiment with Scrivener more but Iām usually under such deadline pressure that I donāt have time. And I still havenāt read the manual (i.e. help files), just the tutorial. So Iām sure thereās lots of room for improvement, and I hope others will share their methods here.